Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829920.1_cds_XP_016503986.1_17477
CDS Infomation

[gene=LOC107822008] [db_xref=GeneID:107822008] [protein=allene oxide synthase, chloroplastic-like] [protein_id=XP_016503986.1] [location=complement(112653..114236)] [gbkey=CDS]
Sequence

ATGGCATCATCTTCTTTTGCTCTTCCTTCTCTTAAGCTACAATTCCCCACACATAAATCA
TCATCATCATCTCGTAACAAGTATTCATCCTCTCTTCAGCCCATTAAATCTTCGGTGTCT
GAAAAGCCACCTTACATTTCCTCTCCAGGGATTTCTCCGATCCAATCTAAACCTACAAAA
CTCCCGATCCGAAAAGTCCCTGGAGACTACGGGCTACCATTGGTCGGTCCGTGGAAGGAC
CGACTTGATTTCTTTTACAATCAAGGGAGAGATGAGTATTTCAAATCTCGAATCCAAAAA
CATCAGTCTACTGTTTTTCGAACCAACATGCCACCTGGTCCTTTCATTTCCTTCAATCCA
AACGTTGTCGTTTTGCTCGACGGTAAAAGTTTCCCCACCCTTTTTGATACTTCTAAGGTT
GAGAAAAAAGATCTTTTCACCGGCACTTTTATGCCTTCTACTGAGCTCACAGGTGGTTAC
CGTGTTCTTTCCTATCTTGATCCTTCTGAACCAAATCACGCCAAGTTAAAGAAACTGCTG
TTTTATCTCCTTTCATCTCGACGCAATGCAGTAATTCCCGAGTTTCACAACAGCTATTCC
GAGCTTTTTGAGACACTAGAAAATGACTTAGCCACTAAAGGAAAAGCTGGACTAAACGCA
GCAAATGATCAAGCAGCGTTTAACTTTCTTGCTCGATCTTTATATGGAGTTAATCCGATA
GATACCAAACTTGGAACTGATGGACCTAAGTTAATTGGCAAATGGGTGTTGTTTCAGCTT
CATCCTTTGCTAATTCTTGGCCTTCCTAAAGTTCTTGAAGATCTTGTTATTCATACTTTT
AGGCTCCCTCCTGCTTTAGTGAAAAAAGACTACCAAAGATTGTACAATTTCTTCTACGAG
AACTCAACTTCCATTCTTGATGAAGCTGAAAGAACTGGTATTTCACGTGAGGAAGCTTGT
CACAATTTGCTATTTGCAACGTGTTTCAATTCTTTTGGAGGGATGAAAATCTTTTTTCCC
AATATGTTGAAATGGATTGGCAGAGCTGGGGTTAAACTCCACACTCAATTAGCTCAAGAG
ATTCGGTCAGTCATTAAATCAAACGGCGGAAAAATCACAATGGGTGCAATAGAAAACATG
CAACTAATGAAATCTGTAGTGTACGAATCCCTACGTATTGAACCGCCAGTGGCATCACAA
TACGGCAGAGCAAAACGTGATATGGTGATTGAATCCCACGACGCAGCATTTGAAATTAAA
GAAGGTGAGTTATTATATGGGTTTCAACCATTTGCAACTAAGGACCCCAAGATTTTTGAC
CGGTCTGAAGAGTTTGTAGCCGACCGGTTTATTGGAGAAGAAGGGGAGAAGTTATTGAAA
CATGTGTTGTGGTCTAATGGATCAGAAAATGAAAGCCCGTCGATAAATAACAAGCAGTGT
GTAGGAAAAGATTTTGTGGTTTTGGTTTCAAGGTTGTTGTTGGTTGAATTGTTCCTTAGA
TATGATTCGTTTGAGATTGAGGTTGGTGCATCTCCTTTAGGTGCTTCTATTACCTTAACG
TCCTTGAAGAGAGCTAGCTTTTGA

Peptide Sequence

PEP ID

XP_016503986.1
PEP Infomation

PREDICTED: allene oxide synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MASSSFALPSLKLQFPTHKSSSSSRNKYSSSLQPIKSSVSEKPPYISSPGISPIQSKPTK
LPIRKVPGDYGLPLVGPWKDRLDFFYNQGRDEYFKSRIQKHQSTVFRTNMPPGPFISFNP
NVVVLLDGKSFPTLFDTSKVEKKDLFTGTFMPSTELTGGYRVLSYLDPSEPNHAKLKKLL
FYLLSSRRNAVIPEFHNSYSELFETLENDLATKGKAGLNAANDQAAFNFLARSLYGVNPI
DTKLGTDGPKLIGKWVLFQLHPLLILGLPKVLEDLVIHTFRLPPALVKKDYQRLYNFFYE
NSTSILDEAERTGISREEACHNLLFATCFNSFGGMKIFFPNMLKWIGRAGVKLHTQLAQE
IRSVIKSNGGKITMGAIENMQLMKSVVYESLRIEPPVASQYGRAKRDMVIESHDAAFEIK
EGELLYGFQPFATKDPKIFDRSEEFVADRFIGEEGEKLLKHVLWSNGSENESPSINNKQC
VGKDFVVLVSRLLLVELFLRYDSFEIEVGASPLGASITLTSLKRASF

Transcript Sequence

Gene sequence data has not been registered.